PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G139300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 145aa    MW: 16607.9 Da    PI: 9.6575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G139300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.4e-1150901054
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       r RR+++Ns++  Lr+ +P++    s+K + ++i++ A++YI++L
  Aqcoe5G139300.1.p 50 RARREELNSKYIALRQQIPNP----STKRDRSSIVKDAIRYIHEL 90
                       89******************9....9****************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.4054090IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.11E-1245105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.39E-85090No hitNo description
PfamPF000101.4E-85090IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-65096IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-950103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MYEPRIASVV YQDGEWKKLP DNSSSDMMKV LSGLVKLTKP SVDFHFPGQR ARREELNSKY  60
IALRQQIPNP STKRDRSSIV KDAIRYIHEL TTTVDELRIL VEKKRKRNDT REMEEGFYSD  120
SPHSNTTVAS DSGFVVSFPL FLLV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196105LRILVEKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243136.15e-21PREDICTED: transcription factor bHLH91-like
RefseqXP_010243137.15e-21PREDICTED: transcription factor bHLH91-like
RefseqXP_010243138.15e-21PREDICTED: transcription factor bHLH91-like
RefseqXP_010243139.15e-21PREDICTED: transcription factor bHLH91-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.26e-15bHLH family protein